Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929072.1_cds_XP_016476472.1_68295
CDS Infomation

[gene=LOC107798048] [db_xref=GeneID:107798048] [protein=uncharacterized protein LOC107798048 isoform X2] [protein_id=XP_016476472.1] [location=complement(join(132519..132523,137091..139239))] [gbkey=CDS]
Sequence

ATGCATGAGAAAAGACCCTTACTTGGAGTTGAATGGCAAAACATGGGGAGATATCGTTCT
GCCAGATTGAGAAAAAAATGCAAGCATTCTTGGGGTACTCTTGAATTTGTTAAAGAGGCA
TTCAAAGGCTTTAACTCTAACACGCACGAATATGAGGAATTAGGTATGATCAAGCAAGGG
AAAGAATCCTTAATTCATGTAGAATCTTCTAAAGAAACCTCATGTTTAATGGCTAATGTC
CATAGCACAAAATCATCTGATCATTGTGATATGGTAGCAAGTGATCGTAAAGCCAGGAGA
AGCTTACTTGGAGTCCGCAAGCAGAAAAATGGGAGGTATGGTGCTGTGATTACGGACCCA
ATTAGGCATAAGAAAGTATGGTTGGCCACCTTTGATACTGCTCAAGAGGCTTCCAAGGCT
TATTTGGTGAAGCAATGTGAATTTGCACGACTAGCCGAGGTTAATGGCAAAAGACACTTA
AGCAAAGTCCAAAGGCTAAAATCAGGAAGGTGTCGTACTTTGCTGAGAGACCCTATTAAG
AAAAAGGATGTTTTTTTGGGAAACTTTGATACTGCTGAAGATGCTTCCAAGGTTGATTTC
TCTAAGAAGGGCAAGGTAGAGAAACTAGTAATGATTAAAGAAGGGAGCATATCGATAACA
TGTGAAGAATCTGAGCTTGAATCATCTGCTGTAGCCACACCTGCAGTGACTGGTAATCAG
AGTTTGAATCAAACTGATGGGATTAGTAATGAAAGAAGCACTTCCTTTGTAAAAAGACCC
TTACTTGGAGTTGAATGGCAAAATATGGGAAGATATAACAAAAAGAAAAGATTGGATGCA
CTTGAATCTGTTGAAGAGCCCGCCAAAGGCTTTTGCTCGAACATGCAAGAAACAGAGAAA
TTAGTAAAGGTCAAGCAAGGGAAAGGACCCGTAATTCATGAAAAATCTTCTAGAGAGACC
ACGTGTTCAATGGATAACGTTCAAGGTGCAAAATTGTCTGATGGGTGTGATACTCCAGGA
GACAATCCTGATGCCAGGAGAAGCATAATTGGAGTCCGAAGGCAAAAGAATGGGAGGTAT
GGCGCTGTGATTACAGATCCAATCAGGCATAAGAAGGTATGGATCGGCACTTTTGACACT
GTTGAAGAAGCTTCACAAGCTTATTTCTCCAAGAAGTGTGAGTTCGAGAAATTAATCCAG
AGTAAACAAGGGAACAAACCAAAGAGTTATGAACAACTTCAGCCTGAATCATCCGATGAG
TGTAATACTGTAACAAGCAATCCTAAAGCCAAGAGAAGCTTACTTGGAGTCCGAAGGCAA
AAGAATGGGAGGTATGGTGTTGAACCGGAATCATTTAGGGGAGCATTATCTCCTCTGGCT
AATGATCAGTCCTTAAATACTGTTGGTTTAAGTAGAAGTGGAAGAAGCAATTCTCCCGAA
ACATCACACTTCATTGGGGTTCGCAAGAGAAATTCTGGGAATTATGCTTCCGAGATTAGA
AACCCCATTAGTAAGAAAAGAATTTGGTTAGGGACTTACGGTACTGCTGAAGAGGCTTCC
CAGGCTTATCAATCTAAGAAGCTCGAGTTTCAGAAACTACTCAAGGTGAAGCAGCAGTGC
AATAAGCAAATATCTCGTGCAAGGGAGATTCAGGATGGGAAAAGGAAATTAGTCAATGTC
AAGCTAGGACATGAAACTGTAAATCATGAAGAATTTCAGTTCGAATCAGCTGGTGGAGCC
TCATCCTTAGAAATTGATGTTCCAATATCAAATTTATCTGATGGAGGAAGTGACCAGGGG
ATTGATTTTCACGAAATAAGCCACTCCATGGGGGTTCAAAAGAGAAAATCAGGAAAATAT
ACTTATGAAATTACAAATCGCATTAGTATGACAAAAATGTCGTTGGGGTCTGTAAGCCCT
ACTGAAGAAGCTTTCCATGTTGAGCAGTCAAAGAAATTCGAATTTCAGAGCTCAAAGAAT
GTCGAGCTGCAAAGCAATCCAACTGATTCTAGTGCAGGTGAGAAGCAAGCAGGTCAAGAG
GATGAAGATTTGTGGATGGGCCGATGGGTCCAACTTCCAGGTGATAGGGCAGTCAAATTT
TCACTCCAACTAGGCTTACCGATCATTGATAACTATGGATCTCTTTTAGTCTGA

Peptide Sequence

PEP ID

XP_016476472.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107798048 isoform X2 [Nicotiana tabacum]
Sequence

MHEKRPLLGVEWQNMGRYRSARLRKKCKHSWGTLEFVKEAFKGFNSNTHEYEELGMIKQG
KESLIHVESSKETSCLMANVHSTKSSDHCDMVASDRKARRSLLGVRKQKNGRYGAVITDP
IRHKKVWLATFDTAQEASKAYLVKQCEFARLAEVNGKRHLSKVQRLKSGRCRTLLRDPIK
KKDVFLGNFDTAEDASKVDFSKKGKVEKLVMIKEGSISITCEESELESSAVATPAVTGNQ
SLNQTDGISNERSTSFVKRPLLGVEWQNMGRYNKKKRLDALESVEEPAKGFCSNMQETEK
LVKVKQGKGPVIHEKSSRETTCSMDNVQGAKLSDGCDTPGDNPDARRSIIGVRRQKNGRY
GAVITDPIRHKKVWIGTFDTVEEASQAYFSKKCEFEKLIQSKQGNKPKSYEQLQPESSDE
CNTVTSNPKAKRSLLGVRRQKNGRYGVEPESFRGALSPLANDQSLNTVGLSRSGRSNSPE
TSHFIGVRKRNSGNYASEIRNPISKKRIWLGTYGTAEEASQAYQSKKLEFQKLLKVKQQC
NKQISRAREIQDGKRKLVNVKLGHETVNHEEFQFESAGGASSLEIDVPISNLSDGGSDQG
IDFHEISHSMGVQKRKSGKYTYEITNRISMTKMSLGSVSPTEEAFHVEQSKKFEFQSSKN
VELQSNPTDSSAGEKQAGQEDEDLWMGRWVQLPGDRAVKFSLQLGLPIIDNYGSLLV

Transcript Sequence

Gene sequence data has not been registered.